BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034H09LP1|AL429971
(819 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1719 1516 0.0
>3x_Contig1719
Length = 15804
Score = 1516 bits (753), Expect = 0.0
Identities = 793/819 (96%)
Strand = Plus / Plus
Query: 1 gatcaagctcataactacgccgagcacatcagaagggttagaaaaggggaaagaatcgaa 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4798 gatcaagctcataactacgccgagcacatcagatgggttagaaaaggggaaagaatcgaa 4857
Query: 61 tttcacgatgaaaagaaatggaaatgcttcccatcgttctccattttgaaaatagaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4858 tttcacgatgaaaagaaatggaaatgcttcccatcgttctccattttgaaaatagaaatg 4917
Query: 121 gactacgtgttcttatttttttgtttatatgttagtatattgcattaaagtatacttact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4918 gactacgtgttcttatttttttgtttatatgttagtatattgcattaaagtatacttact 4977
Query: 181 gattaaaagacttctaagaaaggagcgatacaaaawaaggkatgagtgtatttgtacaaa 240
||||||||||||||||||| |||||| |||||||| |||| |||||||||||||||||||
Sbjct: 4978 gattaaaagacttctaagataggagctatacaaaataaggtatgagtgtatttgtacaaa 5037
Query: 241 tataaaawtccattgaaggagaacgagagaatacaataagagcttgattacaacttatcg 300
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5038 tataaaattccattgaaggagaacgagagactacaataagagcttgattacaacttatcg 5097
Query: 301 tagtattcttgccagcctgggacttcttccttcataccttgtctctttctagcagccaag 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 5098 tagtattcttgccagcctggaacttcttccttcataccttgtctctttctagcagccaag 5157
Query: 361 acaatttcaccagccttggtgggtgggtccaatgggkcagtacctagagtggcccagtga 420
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 5158 acaatttcaccagccttggtggatgggtccaatgggtcagtacctagagtggcccagtga 5217
Query: 421 tcgaacaccatctgtgggaaagcttgamcaccggtagcttgtctcaattcaccagtkaaa 480
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 5218 tcgaacaccatctgtgggaaagcttgaccaccggtagcttgtctcaattcaccagtgaaa 5277
Query: 481 mcgaaagattcgttaattggcaagtwagccttgacggtgaacaatggagtwcctggtctt 540
|||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 5278 ccgaaagattcgttaattggcaagtaagccttgacggtgaacaatggagtacctggtctt 5337
Query: 541 tgttcttcagagamgacttgacctctcttcttgttcaagamggagtagatamcaccaata 600
||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 5338 tgttcttcagagacgacttgacctctcttcttgttcaagacggagtagataccaccaata 5397
Query: 601 gcttgttctggacattgaatttcgaccaagaagactggktcttgaatctttggttcagcc 660
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5398 gcttgttctggacattgaatttcgaccaagaagactggttcttgaatctttggttcagcc 5457
Query: 661 aacaagaaaccggcgtragttgcccttctcatggttgggatgatttkaccaccacctctg 720
|||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 5458 aacaagaaaccggcgtaagtagcccttctcatggttgggatgatttgaccaccacctctg 5517
Query: 721 tkaatggcatcagcatgcaaggkaamatccaagatgttaactctaacggrtctcatttgt 780
| |||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 5518 tgaatggcatcagcatgcaaggtaacatccaagatgttaactctaacggatctcatttgt 5577
Query: 781 tcaccgaagattggaccctccttggtagcccattggaaa 819
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5578 tcaccgaagattggaccctccttggtagcccattggaaa 5616
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5460
Number of Sequences: 1807
Number of extensions: 5460
Number of successful extensions: 116
Number of sequences better than 1.0e-20: 1
length of query: 819
length of database: 10,358,551
effective HSP length: 16
effective length of query: 803
effective length of database: 10,329,639
effective search space: 8294700117
effective search space used: 8294700117
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)